Transcript: ENST00000496461.1 GOT2-003

Description

glutamic-oxaloacetic transaminase 2, mitochondrial [Source:HGNC Symbol;Acc:4433]

Gene Synonyms

KAT4, KATIV, mitAAT

Location

Chromosome 16: 58,752,121-58,768,206 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 6620 variant alleles and maps to 170 oligo probes.

Gene

This transcript is a product of gene ENSG00000125166.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000245206.5	GOT2-001	2462	430aa	ENSP00000245206.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10801	P00505	NM_002080.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434819.2	GOT2-005	1615	387aa	ENSP00000394100.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS67045	E7ERW2	NM_001286220.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568368.1	GOT2-010	516	59aa	ENSP00000456205.1	Nonsense mediated decay		H3BRE7	-	-
ENST00000564400.1	GOT2-009	983	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492378.1	GOT2-002	987	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496461.1	GOT2-003	981	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494627.1	GOT2-004	889	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 981 bps,

Version

ENST00000496461.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000258291 (version 1)

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Transcript: ENST00000496461.1 GOT2-003

Summary