Description
SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:26009]
Gene Synonyms
FLJ20356
Location
Chromosome 4: 8,211,391-8,221,199 forward strand.
About this transcript
This transcript has 6 exons, is associated with 5794 variant alleles and maps to 191 oligo probes.
Gene
This transcript is a product of gene ENSG00000125089.12 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000245105.3 | SH3TC1-001 | 4226 | 1336aa | ENSP00000245105.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3399 | D6RC98 E7EQR1 F5GXD3 Q8TE82 | NM_018986.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000539824.1 | SH3TC1-201 | 4293 | 1260aa | ENSP00000441045.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RC98 F5GXD3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000382521.3 | SH3TC1-004 | 829 | 113aa | ENSP00000371961.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q6NVH2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000457650.2 | SH3TC1-005 | 617 | 94aa | ENSP00000390311.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EQR1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000508641.1 | SH3TC1-030 | 551 | 183aa | ENSP00000426035.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YA34 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000512966.1 | SH3TC1-007 | 514 | 41aa | ENSP00000475411.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000509119.1 | SH3TC1-011 | 509 | 105aa | ENSP00000422315.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RC98 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000515682.1 | SH3TC1-003 | 4293 | 76aa | ENSP00000425079.1 | Nonsense mediated decay | D6REB6 | - | - | |
| ENST00000502669.1 | SH3TC1-002 | 3484 | 202aa | ENSP00000425970.1 | Nonsense mediated decay | D6RI07 | - | - | |
| ENST00000511002.1 | SH3TC1-017 | 1124 | 101aa | ENSP00000423583.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000507891.1 | SH3TC1-032 | 558 | 25aa | ENSP00000427316.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000514274.1 | SH3TC1-029 | 565 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000503284.1 | SH3TC1-013 | 560 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000510763.1 | SH3TC1-012 | 543 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000507801.1 | SH3TC1-021 | 538 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000504822.1 | SH3TC1-019 | 259 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000506360.1 | SH3TC1-015 | 5829 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000502559.1 | SH3TC1-008 | 3798 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000502350.1 | SH3TC1-009 | 2258 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000508183.1 | SH3TC1-010 | 1410 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000512100.1 | SH3TC1-023 | 755 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000504223.1 | SH3TC1-014 | 698 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000509553.1 | SH3TC1-026 | 627 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000513495.1 | SH3TC1-016 | 600 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000507123.1 | SH3TC1-022 | 554 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000508438.1 | SH3TC1-027 | 515 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |