Transcript: ENST00000371436.6 RUNX2-004

Description

runt-related transcription factor 2 [Source:HGNC Symbol;Acc:10472]

Gene Synonyms

AML3, CBF-alpha-1, CBFA1, CCD, CCD1, CLCD, OSF-2, OSF2, PEA2aA, PEBP2A, PEBP2A1, PEBP2aA, PEBP2aA1

Location

Chromosome 6: 45,296,464-45,515,130 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 24 domains and features, is associated with 89855 variant alleles and maps to 499 oligo probes.

Gene

This transcript is a product of gene ENSG00000124813.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371438.1	RUNX2-003	5698	521aa	ENSP00000360493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43467	Q13950 U3RG86	NM_001024630.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371432.3	RUNX2-202	5634	485aa	ENSP00000360486.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS64443	F8W8U5 Q32MY8 U3RG86	NM_001278478.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359524.5	RUNX2-001	5390	507aa	ENSP00000352514.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q13950 Q32MY8 U3RG86	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000576263.1	RUNX2-008	2256	542aa	ENSP00000458178.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L0L0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465038.2	RUNX2-002	1770	521aa	ENSP00000420707.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43467	Q13950 U3RG86	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000352853.5	RUNX2-201	1770	589aa	ENSP00000319087.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T802 U3RG86	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541979.1	RUNX2-203	1704	567aa	ENSP00000446290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6RGB9 U3RG86	NM_001015051.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371436.6	RUNX2-004	1588	499aa	ENSP00000360491.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43468	Q13950 U3RG86	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478660.2	RUNX2-009	2308	276aa	ENSP00000460188.1	Nonsense mediated decay		I3L354 Q32MY8	-	-
ENST00000483377.1	RUNX2-007	1475	37aa	ENSP00000461357.1	Nonsense mediated decay		I3L4L9	-	-
ENST00000483243.1	RUNX2-005	464	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473041.1	RUNX2-006	283	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,588 bps, Translation length: 499 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13950

CCDS

This transcript is a member of the Human CCDS set: CCDS43468

Version

ENST00000371436.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000040756 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000371436.6 RUNX2-004

Summary