Transcript: ENST00000471433.1 RREB1-011

Description

ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:10449]

Gene Synonyms

FINB, HNT, LZ321, RREB-1, Zep-1

Location

Chromosome 6: 7,108,054-7,211,104 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 18 domains and features, is associated with 47617 variant alleles and maps to 236 oligo probes.

Gene

This transcript is a product of gene ENSG00000124782.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379938.2	RREB1-001	8778	1742aa	ENSP00000369270.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34335	C9JE09 C9JPJ6 C9JU34 Q92766	NM_001003700.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000349384.6	RREB1-002	7440	1687aa	ENSP00000305560.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34336	C9JE09 C9JPJ6 C9JU34 Q92766	NM_001003698.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379933.3	RREB1-004	5826	1687aa	ENSP00000369265.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34336	C9JE09 C9JPJ6 C9JU34 Q92766	NM_001168344.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334984.6	RREB1-003	5789	1476aa	ENSP00000335574.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54963	C9JE09 C9JPJ6 C9JU34 Q92766	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483150.1	RREB1-008	2833	778aa	ENSP00000419511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JE09 C9JPJ6 C9JU34	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000471433.1	RREB1-011	1021	164aa	ENSP00000420299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JE09 C9JPJ6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000491191.1	RREB1-007	998	136aa	ENSP00000420519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JE09	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000467782.1	RREB1-012	243	4aa	ENSP00000420571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475946.1	RREB1-005	9067	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 4, Transcript length: 1,021 bps, Translation length: 164 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000471433.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000353011 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000471433.1 RREB1-011

Summary