Transcript: ENST00000334984.6 RREB1-003

Description

ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:10449]

Gene Synonyms

FINB, HNT, LZ321, RREB-1, Zep-1

Location

Chromosome 6: 7,108,264-7,250,245 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 79 domains and features, is associated with 67788 variant alleles and maps to 544 oligo probes.

Gene

This transcript is a product of gene ENSG00000124782.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379938.2	RREB1-001	8778	1742aa	ENSP00000369270.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34335	C9JE09 C9JPJ6 C9JU34 Q92766	NM_001003700.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000349384.6	RREB1-002	7440	1687aa	ENSP00000305560.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34336	C9JE09 C9JPJ6 C9JU34 Q92766	NM_001003698.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379933.3	RREB1-004	5826	1687aa	ENSP00000369265.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34336	C9JE09 C9JPJ6 C9JU34 Q92766	NM_001168344.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334984.6	RREB1-003	5789	1476aa	ENSP00000335574.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54963	C9JE09 C9JPJ6 C9JU34 Q92766	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483150.1	RREB1-008	2833	778aa	ENSP00000419511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JE09 C9JPJ6 C9JU34	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000471433.1	RREB1-011	1021	164aa	ENSP00000420299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JE09 C9JPJ6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000491191.1	RREB1-007	998	136aa	ENSP00000420519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JE09	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000467782.1	RREB1-012	243	4aa	ENSP00000420571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475946.1	RREB1-005	9067	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 9, Transcript length: 5,789 bps, Translation length: 1,476 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92766

CCDS

This transcript is a member of the Human CCDS set: CCDS54963

Version

ENST00000334984.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000352986 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000334984.6 RREB1-003

Summary