Transcript: ENST00000409312.1 MED20-007

Description

mediator complex subunit 20 [Source:HGNC Symbol;Acc:16840]

Gene Synonyms

DKFZp586D2223, PRO0213, TRFP

Location

Chromosome 6: 41,874,542-41,888,857 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 6268 variant alleles and maps to 215 oligo probes.

Gene

This transcript is a product of gene ENSG00000124641.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265350.4	MED20-001	2438	212aa	ENSP00000265350.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4862	A6PVP4 B3KUJ9 Q9H944	NM_004275.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409312.1	MED20-007	932	123aa	ENSP00000386816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DE08	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409060.1	MED20-003	815	145aa	ENSP00000386668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBQ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394251.2	MED20-004	531	140aa	ENSP00000377795.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVP4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000434077.1	MED20-005	307	60aa	ENSP00000403061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBQ1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000467535.1	MED20-002	2602	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482361.1	MED20-006	1481	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 932 bps, Translation length: 123 residues

Version

ENST00000409312.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000335443 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000409312.1 MED20-007

Summary