Transcript: ENST00000358791.5 BCAS4-001

Description

breast carcinoma amplified sequence 4 [Source:HGNC Symbol;Acc:14367]

Gene Synonyms

CNOL, FLJ20495

Location

Chromosome 20: 49,411,431-49,493,714 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 2 domains and features, is associated with 35474 variant alleles and maps to 471 oligo probes.

Gene

This transcript is a product of gene ENSG00000124243.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358791.5	BCAS4-001	1378	211aa	ENSP00000351642.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33487	Q8TDM0	NM_017843.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371608.2	BCAS4-002	1181	203aa	ENSP00000360669.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13432	Q8TDM0	NM_198799.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000262591.5	BCAS4-201	1109	158aa	ENSP00000262591.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BXG3	NM_001010974.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000609336.1	BCAS4-006	787	181aa	ENSP00000477167.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445038.1	BCAS4-003	365	117aa	ENSP00000392594.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000463943.1	BCAS4-005	1498	89aa	ENSP00000418559.2	Nonsense mediated decay		-	-	-
ENST00000485049.1	BCAS4-004	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,378 bps, Translation length: 211 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TDM0

CCDS

This transcript is a member of the Human CCDS set: CCDS33487

Version

ENST00000358791.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000079700 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000358791.5 BCAS4-001

Summary