Transcript: ENST00000482556.1 PREX1-002

Description

phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 [Source:HGNC Symbol;Acc:32594]

Gene Synonyms

KIAA1415, P-REX1

Location

About this transcript

This transcript has 22 exons, is annotated with 4 domains and features, is associated with 15902 variant alleles and maps to 714 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371941.3	PREX1-001	6636	1659aa	ENSP00000361009.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13410	Q8TCU6	NM_020820.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396220.1	PREX1-201	6737	1561aa	ENSP00000379522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TCU6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482556.1	PREX1-002	4682	883aa	ENSP00000434632.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000496915.1	PREX1-003	478	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 18, Transcript length: 4,682 bps, Translation length: 883 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000482556.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000079624 (version 3)