Transcript: ENST00000463813.1 ACSL3-004

Description

acyl-CoA synthetase long-chain family member 3 [Source:HGNC Symbol;Acc:3570]

Gene Synonyms

ACS3, FACL3, LACS3, PRO2194

Location

Chromosome 2: 223,782,406-223,783,822 forward strand.

About this transcript

This transcript has 2 exons, is associated with 673 variant alleles and maps to 63 oligo probes.

Gene

This transcript is a product of gene ENSG00000123983.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000357430.3	ACSL3-001	5679	720aa	ENSP00000350012.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2455	B3KMA6 C9JC11 F5GWH2 F5H062 O95573 Q6PIM8	NM_004457.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392066.3	ACSL3-002	3147	720aa	ENSP00000375918.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2455	B3KMA6 C9JC11 F5GWH2 F5H062 O95573 Q6PIM8	NM_203372.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413316.1	ACSL3-003	650	88aa	ENSP00000416913.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JC11	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000421680.1	ACSL3-005	639	213aa	ENSP00000404182.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C260	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000540115.1	ACSL3-012	624	141aa	ENSP00000441643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GWH2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000535678.1	ACSL3-010	560	95aa	ENSP00000438342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JC11 F5H062	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000407441.2	ACSL3-007	538	179aa	ENSP00000385157.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000474422.1	ACSL3-008	760	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495541.1	ACSL3-009	749	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463813.1	ACSL3-004	509	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000542810.1	ACSL3-011	428	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 509 bps,

Version

ENST00000463813.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000331003 (version 1)

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Transcript: ENST00000463813.1 ACSL3-004

Summary