Transcript: ENST00000379341.4 PRDX4-001

Description

peroxiredoxin 4 [Source:HGNC Symbol;Acc:17169]

Gene Synonyms

AOE37-2, HEL-S-97n, PRX-4

Location

Chromosome X: 23,685,563-23,704,516 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 6328 variant alleles and maps to 359 oligo probes.

Gene

This transcript is a product of gene ENSG00000123131.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379341.4	PRDX4-001	1005	271aa	ENSP00000368646.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14206	Q13162	NM_006406.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379331.3	PRDX4-004	852	186aa	ENSP00000368635.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NG45	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379349.1	PRDX4-002	815	185aa	ENSP00000368654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NJJ0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000439422.1	PRDX4-005	554	161aa	ENSP00000413736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000495599.1	PRDX4-003	632	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,005 bps, Translation length: 271 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13162

CCDS

This transcript is a member of the Human CCDS set: CCDS14206

Version

ENST00000379341.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000056049 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000379341.4 PRDX4-001

Summary