Transcript: ENST00000538984.1 ITPR2-008

Description

inositol 1,4,5-trisphosphate receptor, type 2 [Source:HGNC Symbol;Acc:6181]

Gene Synonyms

IP3R2

Location

Chromosome 12: 26,564,146-26,580,870 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 7013 variant alleles and maps to 75 oligo probes.

Gene

This transcript is a product of gene ENSG00000123104.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381340.3	ITPR2-001	10511	2701aa	ENSP00000370744.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41764	I1VE21 Q14571	NM_002223.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000242737.5	ITPR2-002	581	181aa	ENSP00000242737.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q14571	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451599.2	ITPR2-004	2577	102aa	ENSP00000408287.2	Nonsense mediated decay		H7C2X9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000545235.1	ITPR2-003	540	79aa	ENSP00000440548.1	Nonsense mediated decay		F5GYT5	-	-
ENST00000545902.1	ITPR2-011	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000540791.1	ITPR2-010	575	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536627.1	ITPR2-009	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000538984.1	ITPR2-008	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000543958.1	ITPR2-007	544	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000540429.1	ITPR2-006	400	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 586 bps,

Version

ENST00000538984.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000402814 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000538984.1 ITPR2-008

Summary