Transcript: ENST00000372764.3 PLAU-001

Description

plasminogen activator, urokinase [Source:HGNC Symbol;Acc:9052]

Gene Synonyms

ATF, BDPLT5, QPD, UPA, URK, u-PA

Location

Chromosome 10: 75,670,915-75,677,255 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 28 domains and features, is associated with 3194 variant alleles and maps to 557 oligo probes.

Gene

This transcript is a product of gene ENSG00000122861.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372764.3	PLAU-001	2321	431aa	ENSP00000361850.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7339	P00749 Q96SE8 Q9UEJ5 S4R3G7	NM_002658.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446342.1	PLAU-202	2658	414aa	ENSP00000388474.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44442	E7ET40 Q9UEJ5	NM_001145031.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372762.4	PLAU-201	2211	395aa	ENSP00000361848.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ESM2 Q9UEJ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481390.1	PLAU-004	468	106aa	ENSP00000474318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3G7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000494287.1	PLAU-007	750	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496926.1	PLAU-005	160	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,321 bps, Translation length: 431 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P00749

CCDS

This transcript is a member of the Human CCDS set: CCDS7339

Version

ENST00000372764.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000048727 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000372764.3 PLAU-001

Summary