Transcript: ENST00000487069.1 EEPD1-004

Description

endonuclease/exonuclease/phosphatase family domain containing 1 [Source:HGNC Symbol;Acc:22223]

Gene Synonyms

HSPC107, KIAA1706

Location

Chromosome 7: 36,320,692-36,336,796 forward strand.

About this transcript

This transcript has 4 exons, is associated with 6950 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSG00000122547.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000242108.4	EEPD1-001	4765	569aa	ENSP00000242108.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34619	Q7L9B9	NM_030636.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534978.1	EEPD1-201	2769	569aa	ENSP00000442692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34619	Q7L9B9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444777.1	EEPD1-005	622	34aa	ENSP00000416373.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000487069.1	EEPD1-004	612	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468591.1	EEPD1-003	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 612 bps,

Version

ENST00000487069.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000337605 (version 1)

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Transcript: ENST00000487069.1 EEPD1-004

Summary