Transcript: ENST00000373467.3 HPCA-001

Description

hippocalcin [Source:HGNC Symbol;Acc:5144]

Gene Synonyms

BDR2

Location

About this transcript

This transcript has 4 exons, is annotated with 24 domains and features, is associated with 3553 variant alleles and maps to 273 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373467.3	HPCA-001	1468	193aa	ENSP00000362566.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS370	P84074	NM_002143.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480118.1	HPCA-005	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459874.1	HPCA-004	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470166.1	HPCA-003	531	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470896.1	HPCA-002	503	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,468 bps, Translation length: 193 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P84074

CCDS

This transcript is a member of the Human CCDS set: CCDS370

Version

ENST00000373467.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000011480 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.