Transcript: ENST00000499392.1 LRAT-001

Description

lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase) [Source:HGNC Symbol;Acc:6685]

Gene Synonyms

LCA14

Location

Chromosome 4: 155,548,224-155,669,472 forward strand.

About this transcript

This transcript has 6 exons, is associated with 46726 variant alleles and maps to 216 oligo probes.

Gene

This transcript is a product of gene ENSG00000121207.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000336356.3	LRAT-005	4928	230aa	ENSP00000337224.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3789	D6RC94 O95237	NM_004744.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507827.1	LRAT-004	2654	230aa	ENSP00000426761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3789	D6RC94 O95237	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502525.1	LRAT-002	546	69aa	ENSP00000422324.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RC94	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000500890.2	LRAT-003	1776	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502474.1	LRAT-007	772	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000499392.1	LRAT-001	603	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510919.1	LRAT-008	493	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510733.1	LRAT-006	5002	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 603 bps,

Version

ENST00000499392.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000364867 (version 2)

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Transcript: ENST00000499392.1 LRAT-001

Summary