Transcript: ENST00000240328.3 TBX2-001

Description

T-box 2 [Source:HGNC Symbol;Acc:11597]

Location

About this transcript

This transcript has 7 exons, is annotated with 25 domains and features, is associated with 5739 variant alleles and maps to 637 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000240328.3	TBX2-001	3339	712aa	ENSP00000240328.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11627	Q13207	NM_005994.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419047.1	TBX2-002	3344	146aa	ENSP00000404781.1	Nonsense mediated decay		F8WCM9	-	-
ENST00000586986.1	TBX2-005	329	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477081.1	TBX2-003	5218	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 3,339 bps, Translation length: 712 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13207

CCDS

This transcript is a member of the Human CCDS set: CCDS11627

Version

ENST00000240328.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000346977 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.