Transcript: ENST00000489448.1 RHOQ-008

Description

ras homolog family member Q [Source:HGNC Symbol;Acc:17736]

Gene Synonyms

ARHQ, HEL-S-42, RASL7A, TC10, TC10A

Location

Chromosome 2: 46,807,423-46,808,185 forward strand.

About this transcript

This transcript has 2 exons, is associated with 372 variant alleles and maps to 354 oligo probes.

Gene

This transcript is a product of gene ENSG00000119729.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000238738.4	RHOQ-001	2975	205aa	ENSP00000238738.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33191	E5RFZ3 P17081	NM_012249.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482449.2	RHOQ-002	674	75aa	ENSP00000428006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFZ3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489471.1	RHOQ-006	869	91aa	ENSP00000428624.1	Nonsense mediated decay		H0YB40	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000473428.1	RHOQ-007	757	34aa	ENSP00000429003.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000432183.1	RHOQ-003	714	50aa	ENSP00000393140.1	Nonsense mediated decay		F8WET9	-	-
ENST00000465198.1	RHOQ-004	318	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494370.1	RHOQ-005	689	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489448.1	RHOQ-008	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 560 bps,

Version

ENST00000489448.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000319416 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000489448.1 RHOQ-008

Summary