Transcript: ENST00000359047.2 TRPM6-002

Description

transient receptor potential cation channel, subfamily M, member 6 [Source:HGNC Symbol;Acc:17995]

Gene Synonyms

CHAK2, FLJ22628, HMGX, HOMG, HOMG1, HSH

Location

Chromosome 9: 77,441,673-77,503,010 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 2 domains and features, is associated with 26889 variant alleles and maps to 191 oligo probes.

Gene

This transcript is a product of gene ENSG00000119121.17 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360774.1	TRPM6-001	8425	2022aa	ENSP00000354006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6647	Q9BX84	NM_017662.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451710.3	TRPM6-206	8437	2026aa	ENSP00000407341.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WAD9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361255.3	TRPM6-201	8271	2017aa	ENSP00000354962.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55318	Q9BX84	NM_001177311.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449912.2	TRPM6-205	8244	2017aa	ENSP00000396672.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55319	Q9BX84	NM_001177310.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376864.4	TRPM6-202	6082	1947aa	ENSP00000366060.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W9E6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376872.3	TRPM6-204	5290	977aa	ENSP00000366068.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G8JLG7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376871.3	TRPM6-203	4936	859aa	ENSP00000366067.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G8JLG6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359047.2	TRPM6-002	1568	303aa	ENSP00000351942.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96LV9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483186.1	TRPM6-004	597	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,568 bps, Translation length: 303 residues

Version

ENST00000359047.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000052694 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000359047.2 TRPM6-002

Summary