Transcript: ENST00000503080.1 UBE2B-006

Description

ubiquitin-conjugating enzyme E2B [Source:HGNC Symbol;Acc:12473]

Gene Synonyms

E2-17kDa, HHR6B, HR6B, RAD6B, UBC2

Location

Chromosome 5: 133,723,829-133,726,296 forward strand.

About this transcript

This transcript has 2 exons, is associated with 1045 variant alleles and maps to 360 oligo probes.

Gene

This transcript is a product of gene ENSG00000119048.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265339.2	UBE2B-001	2515	152aa	ENSP00000265339.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4174	P63146	NM_003337.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507277.1	UBE2B-008	644	141aa	ENSP00000425137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000506787.1	UBE2B-005	500	138aa	ENSP00000426364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YA80	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000510021.1	UBE2B-004	415	44aa	ENSP00000425237.1	Nonsense mediated decay		D6RDW8	-	-
ENST00000511807.1	UBE2B-003	818	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000499038.2	UBE2B-007	682	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503080.1	UBE2B-006	657	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504431.1	UBE2B-002	235	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 657 bps,

Version

ENST00000503080.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000371542 (version 1)

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Transcript: ENST00000503080.1 UBE2B-006

Summary