Transcript: ENST00000237696.5 RARRES1-001

Description

retinoic acid receptor responder (tazarotene induced) 1 [Source:HGNC Symbol;Acc:9867]

Gene Synonyms

LXNL, TIG1

Location

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 15179 variant alleles and maps to 533 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000237696.5	RARRES1-001	1952	294aa	ENSP00000237696.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3184	P49788	NM_206963.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479756.1	RARRES1-002	839	228aa	ENSP00000418556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54665	P49788	NM_002888.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498640.1	RARRES1-003	532	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462663.1	RARRES1-005	366	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471444.1	RARRES1-004	187	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,952 bps, Translation length: 294 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49788

CCDS

This transcript is a member of the Human CCDS set: CCDS3184

Version

ENST00000237696.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000352358 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.