Transcript: ENST00000371037.4 SGIP1-001

Description

SH3-domain GRB2-like (endophilin) interacting protein 1 [Source:HGNC Symbol;Acc:25412]

Gene Synonyms

DKFZp761D221

Location

Chromosome 1: 66,999,965-67,213,982 forward strand.

About this transcript

This transcript has 25 exons, is annotated with 14 domains and features, is associated with 94429 variant alleles and maps to 692 oligo probes.

Gene

This transcript is a product of gene ENSG00000118473.17 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371037.4	SGIP1-001	7768	828aa	ENSP00000360076.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30744	Q9BQI5	NM_032291.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371036.3	SGIP1-202	7273	630aa	ENSP00000360075.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KR01 H9KV65	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371039.1	SGIP1-003	4080	631aa	ENSP00000360078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KR01 H9KV65 Q9BQI5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000237247.6	SGIP1-002	3997	859aa	ENSP00000237247.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BQI5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435165.2	SGIP1-004	3646	333aa	ENSP00000395525.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZV33	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371035.3	SGIP1-201	2180	618aa	ENSP00000360074.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z691 F8WD01	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424320.1	SGIP1-006	951	260aa	ENSP00000410439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6R8P8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000468286.1	SGIP1-007	846	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480548.1	SGIP1-013	801	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483060.1	SGIP1-010	741	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000320161.10	SGIP1-011	680	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487507.1	SGIP1-014	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493564.1	SGIP1-005	525	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484988.2	SGIP1-009	440	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497055.1	SGIP1-008	402	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468570.1	SGIP1-012	324	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 7,768 bps, Translation length: 828 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BQI5

CCDS

This transcript is a member of the Human CCDS set: CCDS30744

Version

ENST00000371037.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000025395 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000371037.4 SGIP1-001

Summary