Transcript: ENST00000465289.1 SLC35A3-002

Description

solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 [Source:HGNC Symbol;Acc:11023]

Gene Synonyms

AMRS

Location

Chromosome 1: 100,435,345-100,492,448 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 22294 variant alleles and maps to 546 oligo probes.

Gene

This transcript is a product of gene ENSG00000117620.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370155.3	SLC35A3-001	2347	325aa	ENSP00000359174.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS762	C9JW63 E9PPQ9 Q9Y2D2	NM_012243.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465289.1	SLC35A3-002	5533	220aa	ENSP00000418527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60205	E9PPQ9 Q9BSB7	NM_001271684.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370153.1	SLC35A3-201	2078	367aa	ENSP00000359172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60204	C9JW63 E9PPQ9 Q9Y2D2	NM_001271685.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427993.2	SLC35A3-004	1759	325aa	ENSP00000414947.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS762	C9JW63 E9PPQ9 Q9Y2D2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422078.1	SLC35A3-005	748	224aa	ENSP00000401679.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JW63 E9PPQ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532693.1	SLC35A3-008	563	84aa	ENSP00000436938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPQ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533028.1	SLC35A3-007	5218	325aa	ENSP00000433849.1	Nonsense mediated decay	CCDS762	C9JW63 E9PPQ9 Q9Y2D2	-	-
ENST00000370156.3	SLC35A3-003	1914	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 5,533 bps, Translation length: 220 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS60205

Version

ENST00000465289.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000029784 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000465289.1 SLC35A3-002

Summary