Transcript: ENST00000281834.3 TNFSF4-001

Description

tumor necrosis factor (ligand) superfamily, member 4 [Source:HGNC Symbol;Acc:11934]

Gene Synonyms

CD134L, CD252, GP34, OX-40L, OX4OL, TXGP1, gp34

Location

About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 9432 variant alleles and maps to 313 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000281834.3	TNFSF4-001	3470	183aa	ENSP00000281834.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1306	P23510	NM_003326.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367718.1	TNFSF4-002	3429	133aa	ENSP00000356691.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IV74	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488053.1	TNFSF4-003	520	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 3,470 bps, Translation length: 183 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23510

CCDS

This transcript is a member of the Human CCDS set: CCDS1306

Version

ENST00000281834.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000084271 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.