Transcript: ENST00000424390.1 PRDX1-004

Description

peroxiredoxin 1 [Source:HGNC Symbol;Acc:9352]

Gene Synonyms

MSP23, NKEF-A, NKEFA, PAG, PAGA, PAGB, PRX1, PRXI, TDPX2

Location

Chromosome 1: 45,980,179-45,988,719 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 4675 variant alleles and maps to 180 oligo probes.

Gene

This transcript is a product of gene ENSG00000117450.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262746.1	PRDX1-201	1233	199aa	ENSP00000262746.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS522	Q06830	NM_181696.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000319248.8	PRDX1-001	1021	199aa	ENSP00000361152.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS522	Q06830	NM_181697.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424390.1	PRDX1-004	795	171aa	ENSP00000389047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000372079.1	PRDX1-003	609	97aa	ENSP00000361150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447184.1	PRDX1-002	606	171aa	ENSP00000407034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000483583.1	PRDX1-005	530	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 795 bps, Translation length: 171 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000424390.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000020848 (version 1)

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Transcript: ENST00000424390.1 PRDX1-004

Summary