Transcript: ENST00000414276.2 APH1A-201

Description

APH1A gamma secretase subunit [Source:HGNC Symbol;Acc:29509]

Gene Synonyms

6530402N02Rik, APH-1, APH-1A, CGI-78, PSF

Location

Chromosome 1: 150,237,823-150,241,416 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 1722 variant alleles and maps to 461 oligo probes.

Gene

This transcript is a product of gene ENSG00000117362.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369109.3	APH1A-002	1713	265aa	ENSP00000358105.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41390	Q96BI3	NM_001077628.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360244.4	APH1A-001	2353	247aa	ENSP00000353380.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41391	B4DMX8 Q96BI3	NM_016022.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414276.2	APH1A-201	1501	195aa	ENSP00000397473.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58025	Q96BI3	NM_001243772.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000236017.5	APH1A-008	663	150aa	ENSP00000236017.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TB21	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461320.1	APH1A-003	1038	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476538.1	APH1A-004	793	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493092.1	APH1A-007	585	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486308.1	APH1A-005	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486720.1	APH1A-006	447	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,501 bps, Translation length: 195 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96BI3

CCDS

This transcript is a member of the Human CCDS set: CCDS58025

Version

ENST00000414276.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000414276.2 APH1A-201

Summary