Transcript: ENST00000372815.1 MYCL-002

Description

v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog [Source:HGNC Symbol;Acc:7555]

Gene Synonyms

BHLHE38, LMYC, MYCL1, bHLHe38

Location

Chromosome 1: 40,365,284-40,367,591 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 1649 variant alleles and maps to 260 oligo probes.

Gene

This transcript is a product of gene ENSG00000116990.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397332.2	MYCL-001	3256	394aa	ENSP00000380494.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53300	E9PQS5 Q86YL9	NM_001033082.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429311.1	MYCL-201	2038	206aa	ENSP00000389358.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQS5 P12524	NM_005376.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372815.1	MYCL-002	1944	236aa	ENSP00000361902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44117	E9PQS5 U5GXR9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372816.2	MYCL-004	1688	364aa	ENSP00000361903.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30682	E9PQS5 P12524 Q86YL9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450953.3	MYCL-003	426	100aa	ENSP00000434375.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQS5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,944 bps, Translation length: 236 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS44117

Version

ENST00000372815.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000025625 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000372815.1 MYCL-002

Summary