Transcript: ENST00000422754.1 IVNS1ABP-007

Description

influenza virus NS1A binding protein [Source:HGNC Symbol;Acc:16951]

Gene Synonyms

ARA3, FLARA3, HSPC068, KIAA0850, KLHL39, ND1, NS-1, NS1, NS1-BP, NS1BP

Location

Chromosome 1: 185,275,882-185,276,794 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 4 domains and features, is associated with 362 variant alleles and maps to 80 oligo probes.

Gene

This transcript is a product of gene ENSG00000116679.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367498.3	IVNS1ABP-001	4199	642aa	ENSP00000356468.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1368	B3KSM1 Q9Y6Y0	NM_006469.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392007.3	IVNS1ABP-201	2570	424aa	ENSP00000375864.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MVR0 B3KSM1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367497.1	IVNS1ABP-006	746	135aa	ENSP00000356467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422754.1	IVNS1ABP-007	564	117aa	ENSP00000401826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y5Y2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000459929.1	IVNS1ABP-002	3657	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494880.1	IVNS1ABP-005	2527	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480769.1	IVNS1ABP-003	3776	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475046.1	IVNS1ABP-004	1816	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468217.1	IVNS1ABP-008	643	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491112.1	IVNS1ABP-009	591	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 564 bps, Translation length: 117 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000422754.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000085780 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000422754.1 IVNS1ABP-007

Summary