Transcript: ENST00000367498.3 IVNS1ABP-001

Description

influenza virus NS1A binding protein [Source:HGNC Symbol;Acc:16951]

Gene Synonyms

ARA3, FLARA3, HSPC068, KIAA0850, KLHL39, ND1, NS-1, NS1, NS1-BP, NS1BP

Location

Chromosome 1: 185,265,520-185,286,461 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 30 domains and features, is associated with 8079 variant alleles and maps to 740 oligo probes.

Gene

This transcript is a product of gene ENSG00000116679.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367498.3	IVNS1ABP-001	4199	642aa	ENSP00000356468.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1368	B3KSM1 Q9Y6Y0	NM_006469.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392007.3	IVNS1ABP-201	2570	424aa	ENSP00000375864.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MVR0 B3KSM1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367497.1	IVNS1ABP-006	746	135aa	ENSP00000356467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422754.1	IVNS1ABP-007	564	117aa	ENSP00000401826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y5Y2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000459929.1	IVNS1ABP-002	3657	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494880.1	IVNS1ABP-005	2527	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480769.1	IVNS1ABP-003	3776	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475046.1	IVNS1ABP-004	1816	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468217.1	IVNS1ABP-008	643	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491112.1	IVNS1ABP-009	591	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 13, Transcript length: 4,199 bps, Translation length: 642 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y6Y0

CCDS

This transcript is a member of the Human CCDS set: CCDS1368

Version

ENST00000367498.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000085774 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000367498.3 IVNS1ABP-001

Summary