Transcript: ENST00000590251.2 ARID3A-009

Description

AT rich interactive domain 3A (BRIGHT-like) [Source:HGNC Symbol;Acc:3031]

Gene Synonyms

BRIGHT, DRIL1, DRIL3, DRX, E2FBP1

Location

Chromosome 19: 966,547-972,064 forward strand.

About this transcript

This transcript has 3 exons, is associated with 3060 variant alleles and maps to 230 oligo probes.

Gene

This transcript is a product of gene ENSG00000116017.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263620.3	ARID3A-001	5983	593aa	ENSP00000263620.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12050	Q99856	NM_005224.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587532.1	ARID3A-008	842	280aa	ENSP00000464969.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJ04	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000592216.1	ARID3A-004	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000592916.1	ARID3A-003	383	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000585895.1	ARID3A-002	377	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000585733.1	ARID3A-007	965	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590251.2	ARID3A-009	608	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590749.2	ARID3A-006	473	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 608 bps,

Version

ENST00000590251.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000458680 (version 2)

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Transcript: ENST00000590251.2 ARID3A-009

Summary