Transcript: ENST00000467888.1 EPAS1-004

Description

endothelial PAS domain protein 1 [Source:HGNC Symbol;Acc:3374]

Gene Synonyms

BHLHE73, ECYT4, HIF2A, HLF, MOP2, PASD2, bHLHe73

Location

Chromosome 2: 46,524,903-46,574,676 forward strand.

About this transcript

This transcript has 3 exons, is associated with 22881 variant alleles and maps to 102 oligo probes.

Gene

This transcript is a product of gene ENSG00000116016.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263734.3	EPAS1-001	5160	870aa	ENSP00000263734.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1825	B3KW07 C9J9N2 Q53SM6 Q99814	NM_001430.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449347.1	EPAS1-007	1067	259aa	ENSP00000406137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9N2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000467888.1	EPAS1-004	665	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460015.1	EPAS1-002	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475822.1	EPAS1-003	551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468530.1	EPAS1-009	452	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466465.1	EPAS1-010	3622	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465318.1	EPAS1-006	741	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483692.1	EPAS1-008	657	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463191.1	EPAS1-005	559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 665 bps,

Version

ENST00000467888.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000328043 (version 1)

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Transcript: ENST00000467888.1 EPAS1-004

Summary