Transcript: ENST00000464443.1 COX7A2L-006

Description

cytochrome c oxidase subunit VIIa polypeptide 2 like [Source:HGNC Symbol;Acc:2289]

Gene Synonyms

COX7AR, COX7RP, EB1, SIG81

Location

Chromosome 2: 42,577,992-42,588,332 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 5331 variant alleles and maps to 272 oligo probes.

Gene

This transcript is a product of gene ENSG00000115944.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378669.1	COX7A2L-001	3056	114aa	ENSP00000367938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1808	O14548 Q6FGA0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000234301.2	COX7A2L-201	1112	114aa	ENSP00000234301.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1808	O14548 Q6FGA0	NM_004718.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000463055.1	COX7A2L-007	540	79aa	ENSP00000431039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJZ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468711.1	COX7A2L-008	516	95aa	ENSP00000429237.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YBD2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000464443.1	COX7A2L-006	895	39aa	ENSP00000428873.1	Nonsense mediated decay		E5RFH8	-	-
ENST00000482463.1	COX7A2L-003	1918	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000423797.2	COX7A2L-010	811	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000607768.1	COX7A2L-009	614	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 895 bps, Translation length: 39 residues

Version

ENST00000464443.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000325858 (version 2)

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Transcript: ENST00000464443.1 COX7A2L-006

Summary