Transcript: ENST00000450560.1 ZNF142-007

Description

zinc finger protein 142 [Source:HGNC Symbol;Acc:12927]

Gene Synonyms

KIAA0236, pHZ-49

Location

Chromosome 2: 219,521,073-219,524,199 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1437 variant alleles and maps to 151 oligo probes.

Gene

This transcript is a product of gene ENSG00000115568.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000411696.2	ZNF142-201	6034	1687aa	ENSP00000398798.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42817	C9J055 P52746	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449707.1	ZNF142-001	5909	1687aa	ENSP00000408643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42817	C9J055 P52746	NM_001105537.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440934.1	ZNF142-008	880	294aa	ENSP00000415156.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000432460.1	ZNF142-006	813	14aa	ENSP00000391599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000450560.1	ZNF142-007	373	26aa	ENSP00000400424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J055	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000450765.1	ZNF142-002	6028	98aa	ENSP00000397456.1	Nonsense mediated decay		C9J055 F2Z2H3	-	-
ENST00000433921.1	ZNF142-004	5800	98aa	ENSP00000405477.1	Nonsense mediated decay		C9J055 F2Z2H3	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 373 bps, Translation length: 26 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000450560.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000336839 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000450560.1 ZNF142-007

Summary