Transcript: ENST00000495200.1 HSPE1-006

Description

heat shock 10kDa protein 1 [Source:HGNC Symbol;Acc:5269]

Gene Synonyms

CPN10, EPF, GROES, HSP10

Location

Chromosome 2: 198,365,162-198,365,853 forward strand.

About this transcript

This transcript has 2 exons, is associated with 398 variant alleles and maps to 230 oligo probes.

Gene

This transcript is a product of gene ENSG00000115541.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000233893.5	HSPE1-001	950	102aa	ENSP00000233893.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2320	P61604 Q9UNM1	NM_002157.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409468.1	HSPE1-004	570	101aa	ENSP00000386447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZL8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409729.1	HSPE1-002	478	47aa	ENSP00000387101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZ54	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465573.1	HSPE1-007	639	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463841.1	HSPE1-005	700	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473395.1	HSPE1-003	569	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495200.1	HSPE1-006	537	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 537 bps,

Version

ENST00000495200.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000335340 (version 1)

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Transcript: ENST00000495200.1 HSPE1-006

Summary