Description
splicing factor 3b, subunit 1, 155kDa [Source:HGNC Symbol;Acc:10768]
Gene Synonyms
Hsh155, MDS, PRP10, PRPF10, Prp10, SAP155, SF3b155
Location
Chromosome 2: 198,256,979-198,258,075 reverse strand.
About this transcript
This transcript has 2 exons, is associated with 920 variant alleles and maps to 228 oligo probes.
Gene
This transcript is a product of gene ENSG00000115524.11 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000335508.6 | SF3B1-001 | 6526 | 1304aa | ENSP00000335321.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33356 | F8WC19 O75533 Q9NTB4 | NM_012433.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000487698.1 | SF3B1-004 | 2127 | 154aa | ENSP00000419896.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DGZ4 F8WC19 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000424674.1 | SF3B1-012 | 723 | 241aa | ENSP00000409435.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000414963.2 | SF3B1-014 | 651 | 144aa | ENSP00000402997.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46479 | F8WC19 O75533 | NM_001005526.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000409915.4 | SF3B1-005 | 600 | 144aa | ENSP00000428820.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46479 | F8WC19 O75533 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000414174.1 | SF3B1-003 | 593 | 37aa | ENSP00000392117.1 | Nonsense mediated decay | F8WC19 | - | - | |
| ENST00000462613.1 | SF3B1-013 | 141 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000470268.1 | SF3B1-002 | 2003 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000482158.1 | SF3B1-010 | 772 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000479532.1 | SF3B1-007 | 587 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000468925.1 | SF3B1-008 | 510 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000496458.1 | SF3B1-011 | 475 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |