Transcript: ENST00000496590.1 TNNC1-002

Description

troponin C type 1 (slow) [Source:HGNC Symbol;Acc:11943]

Gene Synonyms

CMD1Z, CMH13, TN-C, TNC, TNNC

Location

About this transcript

This transcript has 4 exons, is annotated with 15 domains and features, is associated with 790 variant alleles and maps to 253 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000232975.3	TNNC1-001	714	161aa	ENSP00000232975.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2857	C9JDI3 P63316 Q6FH91	NM_003280.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000496590.1	TNNC1-002	727	99aa	ENSP00000420596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JDI3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461086.1	TNNC1-004	337	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 727 bps, Translation length: 99 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000496590.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000351372 (version 1)