Transcript: ENST00000396258.3 WDR48-201

Description

WD repeat domain 48 [Source:HGNC Symbol;Acc:30914]

Gene Synonyms

KIAA1449, P80, UAF1

Location

Chromosome 3: 39,093,507-39,137,879 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 28 domains and features, is associated with 18017 variant alleles and maps to 815 oligo probes.

Gene

This transcript is a product of gene ENSG00000114742.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000302313.5	WDR48-001	3707	677aa	ENSP00000307491.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33738	C9JC24 F8W7Y5 Q8TAF3	NM_020839.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396258.3	WDR48-201	3610	595aa	ENSP00000379557.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TAF3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544962.1	WDR48-203	2864	402aa	ENSP00000445187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TAF3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418020.1	WDR48-202	2140	121aa	ENSP00000408160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQ19	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441361.1	WDR48-008	949	162aa	ENSP00000416900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JC24	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000420940.2	WDR48-003	3765	120aa	ENSP00000415963.2	Nonsense mediated decay		F8W7Y5 F8W9K4	-	-
ENST00000413099.2	WDR48-004	2300	63aa	ENSP00000388720.2	Nonsense mediated decay		F8W7Y5	-	-
ENST00000433841.2	WDR48-006	645	74aa	ENSP00000406025.2	Nonsense mediated decay		F8W6P2 F8W7Y5	-	-
ENST00000423296.2	WDR48-007	563	134aa	ENSP00000401421.2	Nonsense mediated decay		F8W7Q3 F8W7Y5	-	-
ENST00000466405.1	WDR48-005	4925	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477197.1	WDR48-010	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463198.1	WDR48-011	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489838.1	WDR48-009	360	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 3,610 bps, Translation length: 595 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TAF3

Version

ENST00000396258.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000396258.3 WDR48-201

Summary