Transcript: ENST00000520648.1 STC2-006

Description

stanniocalcin 2 [Source:HGNC Symbol;Acc:11374]

Gene Synonyms

STC-2, STCRP

Location

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 2310 variant alleles and maps to 111 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265087.4	STC2-001	5353	302aa	ENSP00000265087.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4388	B3KNF2 E5RG57 O76061 Q6FHC9	NM_003714.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520648.1	STC2-006	616	123aa	ENSP00000428470.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RG57	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000518455.1	STC2-004	473	53aa	ENSP00000427816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RG57	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520593.1	STC2-005	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519511.1	STC2-003	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 616 bps, Translation length: 123 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000520648.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000372722 (version 1)