Transcript: ENST00000231572.3 RARS-001

Description

arginyl-tRNA synthetase [Source:HGNC Symbol;Acc:9870]

Gene Synonyms

ArgRS, DALRD1

Location

Chromosome 5: 167,913,450-167,946,304 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 23 domains and features, is associated with 15302 variant alleles and maps to 573 oligo probes.

Gene

This transcript is a product of gene ENSG00000113643.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000231572.3	RARS-001	2146	660aa	ENSP00000231572.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4367	F5H3T8 P54136	NM_002887.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538719.1	RARS-201	1990	454aa	ENSP00000439108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H3T8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520013.1	RARS-002	1990	129aa	ENSP00000429030.1	Nonsense mediated decay		E5RJM9	-	-
ENST00000521329.1	RARS-004	581	58aa	ENSP00000428494.1	Nonsense mediated decay		E5RI24	-	-
ENST00000522834.1	RARS-005	559	113aa	ENSP00000430035.1	Nonsense mediated decay		E5RH09	-	-
ENST00000520421.1	RARS-009	396	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519346.1	RARS-007	945	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524082.1	RARS-003	757	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000521939.1	RARS-006	678	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518757.1	RARS-008	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,146 bps, Translation length: 660 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P54136

CCDS

This transcript is a member of the Human CCDS set: CCDS4367

Version

ENST00000231572.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252794 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000231572.3 RARS-001

Summary