Transcript: ENST00000369952.3 IMPG1-002

Description

interphotoreceptor matrix proteoglycan 1 [Source:HGNC Symbol;Acc:6055]

Gene Synonyms

GP147, IPM150, SPACR

Location

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 6747 variant alleles and maps to 216 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369950.3	IMPG1-001	3558	797aa	ENSP00000358966.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4985	H0UI08 Q17R60	NM_001563.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369963.3	IMPG1-201	5795	147aa	ENSP00000358980.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68D53	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369952.3	IMPG1-002	835	158aa	ENSP00000358968.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JSC4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 835 bps, Translation length: 158 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000369952.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000041289 (version 1)