Transcript: ENST00000472118.1 PPP2R5D-003

Description

protein phosphatase 2, regulatory subunit B', delta [Source:HGNC Symbol;Acc:9312]

Gene Synonyms

B56D

Location

Chromosome 6: 42,952,292-42,980,078 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 7 domains and features, is associated with 12559 variant alleles and maps to 670 oligo probes.

Gene

This transcript is a product of gene ENSG00000112640.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000485511.1	PPP2R5D-001	3044	602aa	ENSP00000417963.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4878	Q14738	NM_006245.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472118.1	PPP2R5D-003	2963	594aa	ENSP00000420550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PFR3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394110.3	PPP2R5D-004	2894	570aa	ENSP00000377669.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55002	Q14738	NM_180976.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470467.1	PPP2R5D-008	2567	504aa	ENSP00000419756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q59EF0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000461010.1	PPP2R5D-007	1558	496aa	ENSP00000420674.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43464	Q14738	NM_180977.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486843.1	PPP2R5D-011	462	154aa	ENSP00000420529.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000230402.6	PPP2R5D-006	2958	111aa	ENSP00000230402.6	Nonsense mediated decay		H7C5Z1	-	-
ENST00000467447.1	PPP2R5D-009	588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482315.1	PPP2R5D-010	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,963 bps, Translation length: 594 residues

Version

ENST00000472118.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000357962 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000472118.1 PPP2R5D-003

Summary