Transcript: ENST00000374677.3 SLC39A7-001

Description

solute carrier family 39 (zinc transporter), member 7 [Source:HGNC Symbol;Acc:4927]

Gene Synonyms

D6S115E, D6S2244E, H2-KE4, HKE4, KE4, RING5, ZIP7

Location

About this transcript

This transcript has 7 exons, is annotated with 19 domains and features, is associated with 1717 variant alleles and maps to 1943 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374677.3	SLC39A7-001	2409	469aa	ENSP00000363809.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43453	Q29984 Q92504	NM_006979.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374675.3	SLC39A7-002	2153	469aa	ENSP00000363807.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43453	Q29984 Q92504	NM_001077516.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444757.1	SLC39A7-003	1015	220aa	ENSP00000400978.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2AAT0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000463972.1	SLC39A7-005	1410	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,409 bps, Translation length: 469 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92504

CCDS

This transcript is a member of the Human CCDS set: CCDS43453

Version

ENST00000374677.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000076499 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.