Transcript: ENST00000415980.1 FIG4-002

Description

FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae) [Source:HGNC Symbol;Acc:16873]

Gene Synonyms

ALS11, CMT4J, KIAA0274, SAC3, YVS, dJ249I4.1, hSac3

Location

Chromosome 6: 110,087,932-110,106,947 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 7649 variant alleles and maps to 82 oligo probes.

Gene

This transcript is a product of gene ENSG00000112367.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000230124.3	FIG4-001	3011	907aa	ENSP00000230124.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5078	Q5JRV4 Q5TCS4 Q92562	NM_014845.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441478.2	FIG4-201	2262	601aa	ENSP00000399443.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H8L9 Q5JRV4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368941.1	FIG4-005	791	139aa	ENSP00000357937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TCS4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419951.1	FIG4-003	724	99aa	ENSP00000396566.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JRV4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000454215.1	FIG4-004	712	237aa	ENSP00000412156.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TCS4 Q5TCS5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000415980.1	FIG4-002	439	136aa	ENSP00000405660.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 439 bps, Translation length: 136 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000415980.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000041769 (version 1)

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Favourite species

All species

Recent locations

Transcript: ENST00000415980.1 FIG4-002

Summary