Transcript: ENST00000367467.3 SASH1-001

Description

SAM and SH3 domain containing 1 [Source:HGNC Symbol;Acc:19182]

Gene Synonyms

KIAA0790, PEPE1, SH3D6A, dJ323M4, dJ323M4.1

Location

About this transcript

This transcript has 20 exons, is annotated with 30 domains and features, is associated with 94447 variant alleles and maps to 801 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367467.3	SASH1-001	7711	1247aa	ENSP00000356437.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5212	O94885	NM_015278.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367469.1	SASH1-002	591	84aa	ENSP00000356439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TGN6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470750.1	SASH1-003	617	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 7,711 bps, Translation length: 1,247 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O94885

CCDS

This transcript is a member of the Human CCDS set: CCDS5212

Version

ENST00000367467.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000042619 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.