Transcript: ENST00000360290.3 CEP85L-007

Description

centrosomal protein 85kDa-like [Source:HGNC Symbol;Acc:21638]

Gene Synonyms

C6orf204, NY-BR-15, bA57K17.2

Location

Chromosome 6: 118,812,594-118,973,683 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 72491 variant alleles and maps to 302 oligo probes.

Gene

This transcript is a product of gene ENSG00000111860.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368488.5	CEP85L-201	7118	808aa	ENSP00000357474.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55052	A2A3P3 Q5SZL2	NM_001178035.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368491.3	CEP85L-001	7673	805aa	ENSP00000357477.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43498	Q5SZL2	NM_001042475.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419517.2	CEP85L-009	2079	496aa	ENSP00000393317.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5119	Q5SZL2	NM_206921.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392500.3	CEP85L-003	1872	499aa	ENSP00000376288.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SZL2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434604.1	CEP85L-008	1797	576aa	ENSP00000392131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A3P3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000360290.3	CEP85L-007	1736	394aa	ENSP00000353434.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SZL2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472713.1	CEP85L-006	836	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476150.1	CEP85L-002	620	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462101.1	CEP85L-004	483	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489276.1	CEP85L-005	470	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483035.1	CEP85L-010	1585	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 1,736 bps, Translation length: 394 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5SZL2

Version

ENST00000360290.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000312869 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000360290.3 CEP85L-007

Summary