Transcript: ENST00000467171.2 APOBEC1-002

Description

apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 [Source:HGNC Symbol;Acc:604]

Gene Synonyms

APOBEC-1, BEDP, CDAR1, HEPR

Location

About this transcript

This transcript has 4 exons, is associated with 8481 variant alleles and maps to 299 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000229304.4	APOBEC1-001	879	236aa	ENSP00000229304.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8579	P41238	NM_001644.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467171.2	APOBEC1-002	861	36aa	ENSP00000436415.2	Nonsense mediated decay		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 861 bps, Translation length: 36 residues

Version

ENST00000467171.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000280524 (version 3)