Transcript: ENST00000229270.4 TPI1-001

Description

triosephosphate isomerase 1 [Source:HGNC Symbol;Acc:12009]

Gene Synonyms

HEL-S-49, TIM, TPI, TPID

Location

Chromosome 12: 6,976,283-6,980,112 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 2492 variant alleles and maps to 606 oligo probes.

Gene

This transcript is a product of gene ENSG00000111669.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000229270.4	TPI1-001	1763	286aa	ENSP00000229270.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53740	P60174 U3KPS5 U3KPZ0 U3KQF3	NM_001159287.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535434.1	TPI1-201	1476	167aa	ENSP00000443599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58206	P60174 U3KPS5 U3KPZ0 U3KQF3	NM_001258026.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396705.5	TPI1-008	1231	249aa	ENSP00000379933.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8566	P60174 U3KPS5 U3KPZ0 U3KQF3	NM_000365.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493987.1	TPI1-003	839	113aa	ENSP00000475364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KPS5 U3KPZ0 U3KQF3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000495834.1	TPI1-005	820	98aa	ENSP00000475829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KPS5 U3KQF3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000488464.2	TPI1-002	791	167aa	ENSP00000475620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58206	P60174 U3KPS5 U3KPZ0 U3KQF3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462761.1	TPI1-004	374	38aa	ENSP00000475184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KPS5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000474253.1	TPI1-007	427	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482209.1	TPI1-006	328	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,763 bps, Translation length: 286 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P60174

CCDS

This transcript is a member of the Human CCDS set: CCDS53740

Version

ENST00000229270.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000258252 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000229270.4 TPI1-001

Summary