Transcript: ENST00000554616.1 TIMELESS-003

Description

timeless circadian clock [Source:HGNC Symbol;Acc:11813]

Gene Synonyms

TIM, TIM1, TIMELESS1, hTIM

Location

Chromosome 12: 56,811,188-56,843,180 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 11 domains and features, is associated with 15490 variant alleles and maps to 513 oligo probes.

Gene

This transcript is a product of gene ENSG00000111602.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000553532.1	TIMELESS-001	4371	1208aa	ENSP00000450607.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8918	Q9UNS1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000229201.4	TIMELESS-002	4376	1207aa	ENSP00000229201.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UNS1	NM_003920.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554616.1	TIMELESS-003	2578	705aa	ENSP00000450848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EWS5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557589.1	TIMELESS-004	2784	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555808.1	TIMELESS-005	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553314.1	TIMELESS-006	511	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 2,578 bps, Translation length: 705 residues

Version

ENST00000554616.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000409823 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000554616.1 TIMELESS-003

Summary