Transcript: ENST00000536570.1 TRPV4-008

Description

transient receptor potential cation channel, subfamily V, member 4 [Source:HGNC Symbol;Acc:18083]

Gene Synonyms

CMT2C, HMSN2C, OTRPC4, SMAL, SPSMA, SSQTL1, TRP12, VR-OAC, VRL-2, VRL2, VROAC

Location

Chromosome 12: 110,252,506-110,270,540 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 7434 variant alleles and maps to 91 oligo probes.

Gene

This transcript is a product of gene ENSG00000111199.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000418703.2	TRPV4-006	3247	871aa	ENSP00000406191.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9134	F5H6Q4 Q9HBA0	NM_001177431.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261740.2	TRPV4-001	3233	871aa	ENSP00000261740.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9134	F5H6Q4 Q9HBA0	NM_021625.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392719.2	TRPV4-202	3097	824aa	ENSP00000376480.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53828	Q9HBA0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000346520.2	TRPV4-201	3058	811aa	ENSP00000319003.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9135	Q9HBA0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536838.1	TRPV4-005	2514	837aa	ENSP00000444336.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53829	Q9HBA0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541794.1	TRPV4-004	2475	824aa	ENSP00000442167.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53828	Q9HBA0	NM_001177428.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537083.1	TRPV4-003	2436	811aa	ENSP00000442738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9135	Q9HBA0	NM_147204.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544971.1	TRPV4-002	2295	764aa	ENSP00000443611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53827	Q9HBA0	NM_001177433.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538125.1	TRPV4-007	2804	552aa	ENSP00000437449.1	Nonsense mediated decay		F5H6Q4	-	-
ENST00000536570.1	TRPV4-008	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 545 bps,

Version

ENST00000536570.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000403277 (version 1)

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Transcript: ENST00000536570.1 TRPV4-008

Summary