Transcript: ENST00000548496.1 KRT18-006

Description

keratin 18 [Source:HGNC Symbol;Acc:6430]

Gene Synonyms

CYK18, K18

Location

Chromosome 12: 53,345,526-53,346,599 forward strand.

About this transcript

This transcript has 2 exons, is associated with 560 variant alleles and maps to 348 oligo probes.

Gene

This transcript is a product of gene ENSG00000111057.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000388835.3	KRT18-002	1562	430aa	ENSP00000373487.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31809	I6L965 P05783	NM_000224.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550600.1	KRT18-001	1696	391aa	ENSP00000447278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VZY9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000388837.2	KRT18-201	1420	430aa	ENSP00000373489.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31809	I6L965 P05783	NM_199187.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549078.1	KRT18-003	2088	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000548015.1	KRT18-004	928	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000548496.1	KRT18-006	695	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546656.1	KRT18-005	521	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 695 bps,

Version

ENST00000548496.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000406409 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000548496.1 KRT18-006

Summary