Transcript: ENST00000465331.1 CARS-008

Description

cysteinyl-tRNA synthetase [Source:HGNC Symbol;Acc:1493]

Gene Synonyms

CARS1, CYSRS, MGC:11246

Location

Chromosome 11: 3,061,754-3,078,667 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 7775 variant alleles and maps to 174 oligo probes.

Gene

This transcript is a product of gene ENSG00000110619.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380525.4	CARS-004	2758	831aa	ENSP00000369897.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41600	P49589	NM_001194997.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397114.3	CARS-201	2778	738aa	ENSP00000380303.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MVQ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397111.5	CARS-001	2685	748aa	ENSP00000380300.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7742	P49589	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401769.3	CARS-202	2637	739aa	ENSP00000384069.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DI19 B4DKY1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000278224.9	CARS-002	2491	726aa	ENSP00000278224.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41602	B4DI19 P49589	NM_139273.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531387.1	CARS-003	2805	128aa	ENSP00000431368.1	Nonsense mediated decay		E9PLP0	-	-
ENST00000529772.1	CARS-016	2637	83aa	ENSP00000432619.1	Nonsense mediated decay		E9PPK8	-	-
ENST00000439280.2	CARS-007	1021	45aa	ENSP00000408802.2	Nonsense mediated decay		C9JLN0	-	-
ENST00000527330.1	CARS-012	564	76aa	ENSP00000434184.1	Nonsense mediated decay		E9PRS8	-	-
ENST00000470221.2	CARS-006	2466	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465240.1	CARS-010	658	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465331.1	CARS-008	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524825.1	CARS-015	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526890.1	CARS-014	5732	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466442.2	CARS-005	2671	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484484.1	CARS-011	1151	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465207.1	CARS-009	422	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 583 bps,

Version

ENST00000465331.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000030269 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000465331.1 CARS-008

Summary